Physical Chemistry Macromolecules and Self-Assembly

Levels of structure

Topic overview

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Primary structure is the linear sequence of monomers linked by covalent bonds. Local backbone hydrogen bonding produces secondary structures such as α-helices and β-sheets. Tertiary structure is the three-dimensional fold of a single chain, while quaternary structure describes the arrangement of multiple subunits. Larger supramolecular assemblies, including micelles and lipid bilayers, form through reversible non-covalent interactions. The hydrophobic effect is a major driver of folding in aqueous environments, alongside hydrogen bonding, ionic interactions, dispersion forces, and disulfides. Folding reflects a balance of enthalpic and entropic contributions, and cooperative transitions can occur. The lesson also considers how chaperones, denaturants, and allosteric coupling relate to structural organization.

Learning objectives

What you'll learn

  • Distinguish primary, secondary, tertiary, quaternary, and supramolecular structure.
  • Identify the interactions associated with different levels of macromolecular organization.
  • Explain the hydrophobic effect and entropy–enthalpy balance in folding.
  • Describe cooperativity, chaperone roles, and denaturation in structural assembly.
  • Relate quaternary structure to allostery and subunit interactions.
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